Genomic Computations in Biology and Medicine
  1. " Introduction to Proteomics"
    | Abstract | Book |

  2. " Identification and modeling of genes with diurnal oscillations from microarray time series data " , Wang, W., Ghosh, B. K., and Pakrasi, H. B., IEEE/ACM Transactions on Computational Biology and Bioinformatics
    | Abstract | Full Paper |

  3. "A systems level analysis of the effects of light quality on the metabolism of a cyanobacterium " , Singh, A. K., Bhattacharyya-Pakrasi, M., Elvitigala, T., Ghosh, B., Aurora, R., and Pakrasi, H. B., Plant Physiology,
    | Abstract | Full Paper |

  4. "Effect of continuous light on diurnal rhythms in Cyanothece ATCC 51142 " , Elvitigala, T., Stöckel, J., Ghosh, B. K., and Pakrasi, H. B., BMC Genomics,
    | Abstract | Full Paper |

  5. "Using systems biology to simplify complex disease: Immune cartography " , Polpitiya, A. D., McDunn, J. E., Burykin, A., Ghosh, B. K., Perren Cobb, J., Critical Care Medicine, vol. 37(1), Supplement January 2009, pp S16-S21
    | Abstract | Full Paper |

  6. "Arabidopsis transcriptome reveals control circuits regulating redox homeostasis and the role of an AP2 transcription factor" , Khandelwal, A., Elvitigala, T.R., Ghosh, B.K. and Quatrano, R.S., Plant Physiology, October 2008
    | Abstract | Full Paper |

  7. "The genome of Cyanothece 51142, a unicellular diazotrophic cyanobacterium important in the marine nitrogen cycle, Eric A. Welsh, Michelle Liberton, Jana Stöl, Thomas Loh, Thanura Elvitigala, Chunyan Wang, Aye Wollam, Robert S. Fulton, Sandra W. Clifton, Jon M. Jacobs, Rajeev Aurora, Bijoy K. Ghosh, Louis A. Sherman, Richard D. Smith, Richard K. Wilson and Himadri B. Pakrasi PNAS, Sept 2008
    | Abstract | Full Paper |

  8. "Integration of Carbon and Nitrogen Metabolism with Energy Production is Crucial to Light Acclimation in the Cyanobacterium Synechocystis," Sing. A. K., Elvitigala., T., Parkasi., M. B., Aurora., R., Ghosh., B. K., Parkasi., H. B., Plant Physiology, July 2008
    | Abstract | Full Paper |

  9. "Plasticity of the Systemic Inflammatory Response to Acute Infection During Critical Illness: Development of the Riboleukogram," McDunn., J. E., Husain., K. D., Polpitiya., A. D., Burykin., A., Ruan., J., Li., Q., Schierding., W., Lin., N., Dixon., D., Zhang., W., Coopersmith., C. M., Dunne., M., Colonna., M., Ghosh., B. K. Cobb., J. P., PLoS ONE, vol. 3, no. 2, e1564, Feb. 2008, pp. 2-14.
    | Abstract | Full Paper |

  10. "Genetic Regulatory Networks and Coregulation of Genes: A Dynamic Model Based Approach," Polpitiya., A. D., Cobb., J. P., Ghosh., B. K., Proceedings of the New Directions in Control and Applications, Lecture Notes in Control and Information Sciences 321, W. P. Dayawansa, Y. Zhou and A. Lindquist (Eds.) Springer Verlag, 2005, pp. 291-304.
    | Abstract | Full Paper |



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